Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Gm14350-201ENSMUST00000116642 640 ntBASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Usp6nlQ80XC3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Gm24526-201ENSMUST00000082921 158 ntBASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.93□□□□□ -0.02
Usp6nlQ80XC3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Gm13342-201ENSMUST00000121055 207 ntBASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Gm13123-201ENSMUST00000122173 492 ntBASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Gm27243-201ENSMUST00000183964 521 ntBASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Gm4857-201ENSMUST00000192718 785 ntBASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Gm43758-201ENSMUST00000199500 367 ntBASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Olfr284-202ENSMUST00000206647 966 ntBASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Gm16372-201ENSMUST00000073088 450 ntBASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.92□□□□□ -0.02
Usp6nlQ80XC3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms