Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Gm15487-201ENSMUST00000122373 465 ntBASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Gm5425-201ENSMUST00000214125 459 ntBASIC13.3□□□□□ -0.28
Ccdc116Q80X53 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.3□□□□□ -0.28
Ccdc116Q80X53 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.3□□□□□ -0.28
Ccdc116Q80X53 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Ccdc116Q80X53 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Gm12151-201ENSMUST00000121374 290 ntBASIC13.29□□□□□ -0.28
Ccdc116Q80X53 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Gm9522-201ENSMUST00000182394 926 ntBASIC13.29□□□□□ -0.28
Ccdc116Q80X53 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ccdc116Q80X53 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc116Q80X53 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc116Q80X53 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc116Q80X53 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc116Q80X53 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc116Q80X53 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc116Q80X53 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc116Q80X53 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms