Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim62Q80V85 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim62Q80V85 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim62Q80V85 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim62Q80V85 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim62Q80V85 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim62Q80V85 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim62Q80V85 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim62Q80V85 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim62Q80V85 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim62Q80V85 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim62Q80V85 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim62Q80V85 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim62Q80V85 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim62Q80V85 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim62Q80V85 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Trim62Q80V85 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim62Q80V85 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim62Q80V85 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim62Q80V85 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim62Q80V85 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim62Q80V85 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim62Q80V85 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim62Q80V85 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim62Q80V85 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim62Q80V85 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim62Q80V85 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim62Q80V85 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim62Q80V85 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim62Q80V85 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim62Q80V85 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim62Q80V85 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim62Q80V85 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim62Q80V85 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.01□□□□□ -0.17
Trim62Q80V85 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Trim62Q80V85 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.01□□□□□ -0.17
Trim62Q80V85 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim62Q80V85 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.01□□□□□ -0.17
Trim62Q80V85 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim62Q80V85 Gm13689-201ENSMUST00000119360 685 ntBASIC14.01□□□□□ -0.17
Trim62Q80V85 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Trim62Q80V85 Gm9002-201ENSMUST00000178437 499 ntBASIC14.01□□□□□ -0.17
Trim62Q80V85 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim62Q80V85 Gm45384-201ENSMUST00000210451 277 ntBASIC14.01□□□□□ -0.17
Trim62Q80V85 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.01□□□□□ -0.17
Trim62Q80V85 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trim62Q80V85 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim62Q80V85 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Trim62Q80V85 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim62Q80V85 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim62Q80V85 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim62Q80V85 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim62Q80V85 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim62Q80V85 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim62Q80V85 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim62Q80V85 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim62Q80V85 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim62Q80V85 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim62Q80V85 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim62Q80V85 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim62Q80V85 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim62Q80V85 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14□□□□□ -0.17
Trim62Q80V85 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14□□□□□ -0.17
Trim62Q80V85 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14□□□□□ -0.17
Trim62Q80V85 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim62Q80V85 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim62Q80V85 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim62Q80V85 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14□□□□□ -0.17
Trim62Q80V85 Gm17794-201ENSMUST00000220252 955 ntBASIC14□□□□□ -0.17
Trim62Q80V85 AC140375.2-201ENSMUST00000225283 584 ntBASIC14□□□□□ -0.17
Trim62Q80V85 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim62Q80V85 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim62Q80V85 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim62Q80V85 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim62Q80V85 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim62Q80V85 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Trim62Q80V85 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim62Q80V85 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim62Q80V85 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms