Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm14057-201ENSMUST00000120631 482 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm29310-201ENSMUST00000185468 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm21825-201ENSMUST00000185728 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm29109-201ENSMUST00000185895 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm21896-201ENSMUST00000186520 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm21873-201ENSMUST00000186728 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm21794-201ENSMUST00000187056 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm21880-201ENSMUST00000187275 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm21826-201ENSMUST00000187451 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm21198-201ENSMUST00000188393 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm21749-201ENSMUST00000189343 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm21901-201ENSMUST00000189568 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm29424-201ENSMUST00000189716 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm28599-201ENSMUST00000189838 694 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm21867-201ENSMUST00000189917 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm29269-201ENSMUST00000190087 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm21722-201ENSMUST00000190153 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm28423-201ENSMUST00000190701 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm21899-201ENSMUST00000190745 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm21910-201ENSMUST00000191163 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm21849-201ENSMUST00000191571 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm28678-201ENSMUST00000191593 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm20910-201ENSMUST00000193268 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm21871-201ENSMUST00000194621 696 ntBASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ctdp1Q7TSG2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Gm25948-201ENSMUST00000175334 112 ntBASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Mir6956-201ENSMUST00000183598 62 ntBASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Gm18049-201ENSMUST00000208909 581 ntBASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ctdp1Q7TSG2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ctdp1Q7TSG2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctdp1Q7TSG2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctdp1Q7TSG2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctdp1Q7TSG2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctdp1Q7TSG2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctdp1Q7TSG2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctdp1Q7TSG2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctdp1Q7TSG2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ctdp1Q7TSG2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctdp1Q7TSG2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ctdp1Q7TSG2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.78□□□□□ -0.04
Ctdp1Q7TSG2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Ctdp1Q7TSG2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Ctdp1Q7TSG2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms