Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Gm28693-202ENSMUST00000190758 331 ntBASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ddx55Q6ZPL9 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC15.33■□□□□ 0.05
Ddx55Q6ZPL9 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx55Q6ZPL9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ddx55Q6ZPL9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Ddx55Q6ZPL9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Ddx55Q6ZPL9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx55Q6ZPL9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ddx55Q6ZPL9 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.33■□□□□ 0.04
Ddx55Q6ZPL9 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx55Q6ZPL9 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC15.33■□□□□ 0.04
Ddx55Q6ZPL9 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.33■□□□□ 0.04
Ddx55Q6ZPL9 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ddx55Q6ZPL9 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.33■□□□□ 0.04
Ddx55Q6ZPL9 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.33■□□□□ 0.04
Ddx55Q6ZPL9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.33■□□□□ 0.04
Ddx55Q6ZPL9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx55Q6ZPL9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx55Q6ZPL9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx55Q6ZPL9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx55Q6ZPL9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ddx55Q6ZPL9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 CT030182.1-201ENSMUST00000225935 533 ntBASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ddx55Q6ZPL9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ddx55Q6ZPL9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms