Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Gm24830-201ENSMUST00000102024 166 ntBASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Gm25890-201ENSMUST00000177643 165 ntBASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Gm22614-201ENSMUST00000178300 165 ntBASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Gm22042-201ENSMUST00000082989 165 ntBASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Gm26232-201ENSMUST00000083360 166 ntBASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Gm24136-201ENSMUST00000083374 165 ntBASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Gm26110-201ENSMUST00000083971 165 ntBASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC17.37■□□□□ 0.37
Chd4Q6PDQ2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Gm23363-201ENSMUST00000175024 79 ntBASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Gm4782-201ENSMUST00000168705 2046 ntBASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chd4Q6PDQ2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Gm12502-201ENSMUST00000120197 444 ntBASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Gm9445-201ENSMUST00000207454 1285 ntBASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Daam2-202ENSMUST00000224595 1926 ntBASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Gm38157-201ENSMUST00000194178 1698 ntBASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Mir7221-201ENSMUST00000184009 72 ntBASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 AC132317.1-201ENSMUST00000227227 962 ntBASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Chd4Q6PDQ2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Gm28386-201ENSMUST00000189147 1849 ntBASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Gm4366-201ENSMUST00000201488 1342 ntBASIC17.34■□□□□ 0.37
Chd4Q6PDQ2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chd4Q6PDQ2 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms