Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Smarcc2Q6PDG5 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Gm37917-201ENSMUST00000194711 392 ntBASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcc2Q6PDG5 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Gm18905-201ENSMUST00000205454 928 ntBASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Gm19220-201ENSMUST00000222682 803 ntBASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Acot6-202ENSMUST00000222921 3622 ntBASIC15.8■□□□□ 0.12
Smarcc2Q6PDG5 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Gm14928-201ENSMUST00000120198 477 ntBASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.79■□□□□ 0.12
Smarcc2Q6PDG5 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms