Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col11a2Q64739 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC16.04■□□□□ 0.16
Col11a2Q64739 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col11a2Q64739 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Col11a2Q64739 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.04■□□□□ 0.16
Col11a2Q64739 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col11a2Q64739 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col11a2Q64739 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col11a2Q64739 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC16.03■□□□□ 0.16
Col11a2Q64739 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC16.03■□□□□ 0.16
Col11a2Q64739 Gm13045-201ENSMUST00000119019 712 ntBASIC16.03■□□□□ 0.16
Col11a2Q64739 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col11a2Q64739 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col11a2Q64739 Gm7593-201ENSMUST00000187246 644 ntBASIC16.03■□□□□ 0.16
Col11a2Q64739 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC16.03■□□□□ 0.16
Col11a2Q64739 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col11a2Q64739 Spcs1-203ENSMUST00000226374 592 ntBASIC16.03■□□□□ 0.16
Col11a2Q64739 AC167013.1-201ENSMUST00000228592 202 ntBASIC16.03■□□□□ 0.16
Col11a2Q64739 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col11a2Q64739 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col11a2Q64739 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col11a2Q64739 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col11a2Q64739 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Col11a2Q64739 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col11a2Q64739 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col11a2Q64739 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col11a2Q64739 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col11a2Q64739 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col11a2Q64739 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col11a2Q64739 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col11a2Q64739 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col11a2Q64739 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col11a2Q64739 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC16.02■□□□□ 0.16
Col11a2Q64739 Selenot-ps-201ENSMUST00000119098 593 ntBASIC16.02■□□□□ 0.16
Col11a2Q64739 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col11a2Q64739 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC16.02■□□□□ 0.16
Col11a2Q64739 Gm45219-201ENSMUST00000205602 465 ntBASIC16.02■□□□□ 0.16
Col11a2Q64739 Gm45433-201ENSMUST00000209386 247 ntBASIC16.02■□□□□ 0.16
Col11a2Q64739 Gm7848-201ENSMUST00000210739 718 ntBASIC16.02■□□□□ 0.16
Col11a2Q64739 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col11a2Q64739 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col11a2Q64739 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col11a2Q64739 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col11a2Q64739 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.02■□□□□ 0.16
Col11a2Q64739 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col11a2Q64739 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Col11a2Q64739 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col11a2Q64739 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col11a2Q64739 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col11a2Q64739 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col11a2Q64739 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col11a2Q64739 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col11a2Q64739 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Col11a2Q64739 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col11a2Q64739 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col11a2Q64739 Gm6335-201ENSMUST00000118081 1194 ntBASIC16.02■□□□□ 0.15
Col11a2Q64739 Gm7816-201ENSMUST00000119884 1194 ntBASIC16.02■□□□□ 0.15
Col11a2Q64739 Gm15542-201ENSMUST00000121585 1194 ntBASIC16.02■□□□□ 0.15
Col11a2Q64739 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC16.02■□□□□ 0.15
Col11a2Q64739 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col11a2Q64739 Gm17040-202ENSMUST00000170597 889 ntBASIC16.02■□□□□ 0.15
Col11a2Q64739 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.15
Col11a2Q64739 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC16.02■□□□□ 0.15
Col11a2Q64739 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC16.02■□□□□ 0.15
Col11a2Q64739 Gm44651-201ENSMUST00000207343 372 ntBASIC16.02■□□□□ 0.15
Col11a2Q64739 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col11a2Q64739 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC16.02■□□□□ 0.15
Col11a2Q64739 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col11a2Q64739 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Col11a2Q64739 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col11a2Q64739 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Col11a2Q64739 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col11a2Q64739 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col11a2Q64739 Gm5466-201ENSMUST00000119395 1890 ntBASIC16.01■□□□□ 0.15
Col11a2Q64739 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col11a2Q64739 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col11a2Q64739 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col11a2Q64739 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Col11a2Q64739 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col11a2Q64739 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Col11a2Q64739 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC16.01■□□□□ 0.15
Col11a2Q64739 Gm6963-201ENSMUST00000147879 379 ntBASIC16.01■□□□□ 0.15
Col11a2Q64739 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC16.01■□□□□ 0.15
Col11a2Q64739 Gm9211-201ENSMUST00000182882 975 ntBASIC16.01■□□□□ 0.15
Col11a2Q64739 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col11a2Q64739 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC16.01■□□□□ 0.15
Col11a2Q64739 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC16.01■□□□□ 0.15
Col11a2Q64739 Ighv8-10-201ENSMUST00000199579 358 ntBASIC16.01■□□□□ 0.15
Col11a2Q64739 Gm43416-201ENSMUST00000201916 1015 ntBASIC16.01■□□□□ 0.15
Col11a2Q64739 AC141438.2-201ENSMUST00000215068 271 ntBASIC16.01■□□□□ 0.15
Col11a2Q64739 AC125486.1-201ENSMUST00000218701 320 ntBASIC16.01■□□□□ 0.15
Col11a2Q64739 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC16.01■□□□□ 0.15
Col11a2Q64739 AC135114.1-201ENSMUST00000228682 270 ntBASIC16.01■□□□□ 0.15
Col11a2Q64739 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Col11a2Q64739 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col11a2Q64739 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col11a2Q64739 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col11a2Q64739 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col11a2Q64739 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col11a2Q64739 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms