Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SspnQ62147 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.38□□□□□ -0.59
SspnQ62147 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.38□□□□□ -0.59
SspnQ62147 Gm28630-201ENSMUST00000187806 498 ntBASIC11.38□□□□□ -0.59
SspnQ62147 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.38□□□□□ -0.59
SspnQ62147 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SspnQ62147 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
SspnQ62147 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
SspnQ62147 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.38□□□□□ -0.59
SspnQ62147 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.38□□□□□ -0.59
SspnQ62147 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SspnQ62147 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.38□□□□□ -0.59
SspnQ62147 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SspnQ62147 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SspnQ62147 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
SspnQ62147 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SspnQ62147 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.37□□□□□ -0.59
SspnQ62147 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SspnQ62147 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SspnQ62147 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
SspnQ62147 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
SspnQ62147 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.37□□□□□ -0.59
SspnQ62147 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.37□□□□□ -0.59
SspnQ62147 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Gm23935-201ENSMUST00000102303 57 ntBASIC11.37□□□□□ -0.59
SspnQ62147 Gm24270-201ENSMUST00000102326 57 ntBASIC11.37□□□□□ -0.59
SspnQ62147 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
SspnQ62147 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.37□□□□□ -0.59
SspnQ62147 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.37□□□□□ -0.59
SspnQ62147 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.37□□□□□ -0.59
SspnQ62147 Gm24245-201ENSMUST00000157318 57 ntBASIC11.37□□□□□ -0.59
SspnQ62147 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
SspnQ62147 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Gm25948-201ENSMUST00000175334 112 ntBASIC11.37□□□□□ -0.59
SspnQ62147 Gm27622-201ENSMUST00000183779 60 ntBASIC11.37□□□□□ -0.59
SspnQ62147 Gm27430-201ENSMUST00000184585 107 ntBASIC11.37□□□□□ -0.59
SspnQ62147 Gm44333-201ENSMUST00000197168 107 ntBASIC11.37□□□□□ -0.59
SspnQ62147 Gm46209-201ENSMUST00000217912 553 ntBASIC11.37□□□□□ -0.59
SspnQ62147 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SspnQ62147 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
SspnQ62147 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.37□□□□□ -0.59
SspnQ62147 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
SspnQ62147 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SspnQ62147 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.37□□□□□ -0.59
SspnQ62147 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SspnQ62147 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.37□□□□□ -0.59
SspnQ62147 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SspnQ62147 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SspnQ62147 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms