Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.42□□□□□ -0.42
VcanQ62059 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.42□□□□□ -0.42
VcanQ62059 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
VcanQ62059 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.42□□□□□ -0.42
VcanQ62059 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.42□□□□□ -0.42
VcanQ62059 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.42□□□□□ -0.42
VcanQ62059 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.42□□□□□ -0.42
VcanQ62059 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Mir6923-201ENSMUST00000184592 72 ntBASIC12.42□□□□□ -0.42
VcanQ62059 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.42□□□□□ -0.42
VcanQ62059 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
VcanQ62059 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.42□□□□□ -0.42
VcanQ62059 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VcanQ62059 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.41□□□□□ -0.42
VcanQ62059 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Gm43778-201ENSMUST00000199438 199 ntBASIC12.41□□□□□ -0.42
VcanQ62059 Gm19287-201ENSMUST00000203190 358 ntBASIC12.41□□□□□ -0.42
VcanQ62059 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
VcanQ62059 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
VcanQ62059 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
VcanQ62059 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Gm11354-201ENSMUST00000121974 422 ntBASIC12.41□□□□□ -0.42
VcanQ62059 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.41□□□□□ -0.42
VcanQ62059 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
VcanQ62059 Gm6867-201ENSMUST00000219165 425 ntBASIC12.41□□□□□ -0.42
VcanQ62059 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
VcanQ62059 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.41□□□□□ -0.42
VcanQ62059 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.41□□□□□ -0.42
VcanQ62059 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.41□□□□□ -0.42
VcanQ62059 Rprl1-202ENSMUST00000198476 238 ntBASIC12.41□□□□□ -0.42
VcanQ62059 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcanQ62059 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.41□□□□□ -0.42
VcanQ62059 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
VcanQ62059 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.4□□□□□ -0.42
VcanQ62059 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Gm13035-201ENSMUST00000117496 342 ntBASIC12.4□□□□□ -0.42
VcanQ62059 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.4□□□□□ -0.42
VcanQ62059 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.4□□□□□ -0.42
VcanQ62059 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
VcanQ62059 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
VcanQ62059 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.4□□□□□ -0.42
VcanQ62059 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.4□□□□□ -0.42
VcanQ62059 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.4□□□□□ -0.42
VcanQ62059 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcanQ62059 Gm16372-201ENSMUST00000073088 450 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms