Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Vsx2Q61412 Gm28760-201ENSMUST00000185995 736 ntBASIC13.24□□□□□ -0.29
Vsx2Q61412 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.24□□□□□ -0.29
Vsx2Q61412 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Vsx2Q61412 Gm42612-201ENSMUST00000197986 623 ntBASIC13.24□□□□□ -0.29
Vsx2Q61412 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Gm43170-201ENSMUST00000199827 612 ntBASIC13.24□□□□□ -0.29
Vsx2Q61412 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.24□□□□□ -0.29
Vsx2Q61412 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.24□□□□□ -0.29
Vsx2Q61412 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.24□□□□□ -0.29
Vsx2Q61412 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.24□□□□□ -0.29
Vsx2Q61412 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vsx2Q61412 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vsx2Q61412 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Vsx2Q61412 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Vsx2Q61412 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Vsx2Q61412 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vsx2Q61412 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.23□□□□□ -0.29
Vsx2Q61412 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vsx2Q61412 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Vsx2Q61412 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.23□□□□□ -0.29
Vsx2Q61412 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Vsx2Q61412 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Vsx2Q61412 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vsx2Q61412 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.23□□□□□ -0.29
Vsx2Q61412 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
Vsx2Q61412 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vsx2Q61412 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Vsx2Q61412 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.22□□□□□ -0.29
Vsx2Q61412 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Vsx2Q61412 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.22□□□□□ -0.29
Vsx2Q61412 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Vsx2Q61412 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Gm22189-201ENSMUST00000103822 86 ntBASIC13.22□□□□□ -0.29
Vsx2Q61412 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Vsx2Q61412 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Vsx2Q61412 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.22□□□□□ -0.29
Vsx2Q61412 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.22□□□□□ -0.29
Vsx2Q61412 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.22□□□□□ -0.29
Vsx2Q61412 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vsx2Q61412 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.22□□□□□ -0.29
Vsx2Q61412 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.22□□□□□ -0.29
Vsx2Q61412 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Vsx2Q61412 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.22□□□□□ -0.29
Vsx2Q61412 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vsx2Q61412 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms