Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ift88Q61371 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.02■□□□□ -0
Ift88Q61371 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ift88Q61371 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ift88Q61371 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ift88Q61371 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ift88Q61371 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ift88Q61371 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ift88Q61371 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ift88Q61371 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ift88Q61371 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ift88Q61371 Gm8410-201ENSMUST00000117225 605 ntBASIC15.02■□□□□ -0
Ift88Q61371 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.02■□□□□ -0
Ift88Q61371 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ift88Q61371 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Ift88Q61371 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ift88Q61371 Gm9229-201ENSMUST00000222777 126 ntBASIC15.02■□□□□ -0
Ift88Q61371 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ift88Q61371 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ift88Q61371 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ift88Q61371 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ift88Q61371 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ift88Q61371 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ift88Q61371 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ift88Q61371 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ift88Q61371 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ift88Q61371 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ift88Q61371 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ift88Q61371 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ift88Q61371 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ift88Q61371 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ift88Q61371 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ift88Q61371 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ift88Q61371 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.01□□□□□ -0.01
Ift88Q61371 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
Ift88Q61371 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.01□□□□□ -0.01
Ift88Q61371 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ift88Q61371 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.01□□□□□ -0.01
Ift88Q61371 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Ift88Q61371 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ift88Q61371 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Ift88Q61371 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ift88Q61371 Gm7774-201ENSMUST00000200064 533 ntBASIC15.01□□□□□ -0.01
Ift88Q61371 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ift88Q61371 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ift88Q61371 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ift88Q61371 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.01□□□□□ -0.01
Ift88Q61371 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Ift88Q61371 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ift88Q61371 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ift88Q61371 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ift88Q61371 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.01□□□□□ -0.01
Ift88Q61371 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ift88Q61371 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ift88Q61371 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
Ift88Q61371 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15□□□□□ -0.01
Ift88Q61371 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Ift88Q61371 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Ift88Q61371 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Ift88Q61371 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15□□□□□ -0.01
Ift88Q61371 Gm15693-201ENSMUST00000120470 637 ntBASIC15□□□□□ -0.01
Ift88Q61371 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15□□□□□ -0.01
Ift88Q61371 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Ift88Q61371 Gm4804-201ENSMUST00000182234 999 ntBASIC15□□□□□ -0.01
Ift88Q61371 Gm27622-201ENSMUST00000183779 60 ntBASIC15□□□□□ -0.01
Ift88Q61371 Gm27533-201ENSMUST00000183800 152 ntBASIC15□□□□□ -0.01
Ift88Q61371 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15□□□□□ -0.01
Ift88Q61371 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 CT943659.1-201ENSMUST00000215459 326 ntBASIC15□□□□□ -0.01
Ift88Q61371 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15□□□□□ -0.01
Ift88Q61371 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15□□□□□ -0.01
Ift88Q61371 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ift88Q61371 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ift88Q61371 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.99□□□□□ -0.01
Ift88Q61371 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Ift88Q61371 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ift88Q61371 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms