Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Gm13665-201ENSMUST00000120830 528 ntBASIC11.28□□□□□ -0.6
Hcfc1Q61191 Gm13316-201ENSMUST00000140537 691 ntBASIC11.28□□□□□ -0.6
Hcfc1Q61191 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Gm27341-201ENSMUST00000183570 106 ntBASIC11.28□□□□□ -0.6
Hcfc1Q61191 Gm38317-201ENSMUST00000195564 343 ntBASIC11.28□□□□□ -0.6
Hcfc1Q61191 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.28□□□□□ -0.6
Hcfc1Q61191 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hcfc1Q61191 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hcfc1Q61191 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hcfc1Q61191 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hcfc1Q61191 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hcfc1Q61191 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.27□□□□□ -0.6
Hcfc1Q61191 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hcfc1Q61191 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.27□□□□□ -0.6
Hcfc1Q61191 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hcfc1Q61191 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hcfc1Q61191 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hcfc1Q61191 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.27□□□□□ -0.61
Hcfc1Q61191 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Mir5120-201ENSMUST00000175020 78 ntBASIC11.27□□□□□ -0.61
Hcfc1Q61191 Gm25732-201ENSMUST00000175168 60 ntBASIC11.27□□□□□ -0.61
Hcfc1Q61191 Gm16505-201ENSMUST00000179981 232 ntBASIC11.27□□□□□ -0.61
Hcfc1Q61191 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hcfc1Q61191 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hcfc1Q61191 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Gm14028-201ENSMUST00000117434 479 ntBASIC11.26□□□□□ -0.61
Hcfc1Q61191 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.26□□□□□ -0.61
Hcfc1Q61191 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.26□□□□□ -0.61
Hcfc1Q61191 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.26□□□□□ -0.61
Hcfc1Q61191 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.26□□□□□ -0.61
Hcfc1Q61191 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Gm6458-201ENSMUST00000211573 635 ntBASIC11.26□□□□□ -0.61
Hcfc1Q61191 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcfc1Q61191 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.26□□□□□ -0.61
Hcfc1Q61191 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms