Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col12a1Q60847 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col12a1Q60847 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col12a1Q60847 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.07□□□□□ -0.32
Col12a1Q60847 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col12a1Q60847 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col12a1Q60847 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col12a1Q60847 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Col12a1Q60847 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col12a1Q60847 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.07□□□□□ -0.32
Col12a1Q60847 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.07□□□□□ -0.32
Col12a1Q60847 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.07□□□□□ -0.32
Col12a1Q60847 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.07□□□□□ -0.32
Col12a1Q60847 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
Col12a1Q60847 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col12a1Q60847 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col12a1Q60847 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col12a1Q60847 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col12a1Q60847 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col12a1Q60847 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col12a1Q60847 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC13.07□□□□□ -0.32
Col12a1Q60847 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col12a1Q60847 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.07□□□□□ -0.32
Col12a1Q60847 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col12a1Q60847 Gm15515-201ENSMUST00000117827 822 ntBASIC13.07□□□□□ -0.32
Col12a1Q60847 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.07□□□□□ -0.32
Col12a1Q60847 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.07□□□□□ -0.32
Col12a1Q60847 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col12a1Q60847 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.07□□□□□ -0.32
Col12a1Q60847 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col12a1Q60847 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.07□□□□□ -0.32
Col12a1Q60847 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col12a1Q60847 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.06□□□□□ -0.32
Col12a1Q60847 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.06□□□□□ -0.32
Col12a1Q60847 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Gm13296-201ENSMUST00000117854 997 ntBASIC13.06□□□□□ -0.32
Col12a1Q60847 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.06□□□□□ -0.32
Col12a1Q60847 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.06□□□□□ -0.32
Col12a1Q60847 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Col12a1Q60847 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.06□□□□□ -0.32
Col12a1Q60847 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.06□□□□□ -0.32
Col12a1Q60847 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.06□□□□□ -0.32
Col12a1Q60847 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.06□□□□□ -0.32
Col12a1Q60847 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.06□□□□□ -0.32
Col12a1Q60847 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col12a1Q60847 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.06□□□□□ -0.32
Col12a1Q60847 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.06□□□□□ -0.32
Col12a1Q60847 Gm22121-201ENSMUST00000175148 54 ntBASIC13.06□□□□□ -0.32
Col12a1Q60847 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Arhgef33-207ENSMUST00000224966 490 ntBASIC13.06□□□□□ -0.32
Col12a1Q60847 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.06□□□□□ -0.32
Col12a1Q60847 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col12a1Q60847 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Col12a1Q60847 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col12a1Q60847 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Col12a1Q60847 Gm9358-201ENSMUST00000183067 927 ntBASIC13.05□□□□□ -0.32
Col12a1Q60847 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.05□□□□□ -0.32
Col12a1Q60847 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.05□□□□□ -0.32
Col12a1Q60847 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Col12a1Q60847 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Col12a1Q60847 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col12a1Q60847 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.05□□□□□ -0.32
Col12a1Q60847 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col12a1Q60847 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.05□□□□□ -0.32
Col12a1Q60847 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col12a1Q60847 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms