Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClpbQ60649 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ClpbQ60649 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClpbQ60649 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClpbQ60649 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.04□□□□□ -0.32
ClpbQ60649 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClpbQ60649 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.04□□□□□ -0.32
ClpbQ60649 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
ClpbQ60649 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.04□□□□□ -0.32
ClpbQ60649 Gm29741-201ENSMUST00000192667 421 ntBASIC13.04□□□□□ -0.32
ClpbQ60649 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.04□□□□□ -0.32
ClpbQ60649 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.04□□□□□ -0.32
ClpbQ60649 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.04□□□□□ -0.32
ClpbQ60649 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.04□□□□□ -0.32
ClpbQ60649 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClpbQ60649 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.04□□□□□ -0.32
ClpbQ60649 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClpbQ60649 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.04□□□□□ -0.32
ClpbQ60649 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
ClpbQ60649 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.04□□□□□ -0.32
ClpbQ60649 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClpbQ60649 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClpbQ60649 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ClpbQ60649 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClpbQ60649 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ClpbQ60649 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
ClpbQ60649 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
ClpbQ60649 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.03□□□□□ -0.32
ClpbQ60649 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.03□□□□□ -0.32
ClpbQ60649 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ClpbQ60649 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ClpbQ60649 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ClpbQ60649 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.03□□□□□ -0.32
ClpbQ60649 Gm11424-201ENSMUST00000121929 829 ntBASIC13.03□□□□□ -0.32
ClpbQ60649 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.03□□□□□ -0.32
ClpbQ60649 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 Gm5745-201ENSMUST00000183748 313 ntBASIC13.03□□□□□ -0.32
ClpbQ60649 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ClpbQ60649 Gm28631-201ENSMUST00000190740 334 ntBASIC13.03□□□□□ -0.32
ClpbQ60649 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ClpbQ60649 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.03□□□□□ -0.32
ClpbQ60649 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.03□□□□□ -0.32
ClpbQ60649 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ClpbQ60649 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.03□□□□□ -0.32
ClpbQ60649 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
ClpbQ60649 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
ClpbQ60649 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
ClpbQ60649 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
ClpbQ60649 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
ClpbQ60649 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.03□□□□□ -0.32
ClpbQ60649 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClpbQ60649 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClpbQ60649 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClpbQ60649 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClpbQ60649 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClpbQ60649 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.02□□□□□ -0.32
ClpbQ60649 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClpbQ60649 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ClpbQ60649 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ClpbQ60649 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ClpbQ60649 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ClpbQ60649 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClpbQ60649 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
ClpbQ60649 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.02□□□□□ -0.33
ClpbQ60649 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ClpbQ60649 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
ClpbQ60649 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.02□□□□□ -0.33
ClpbQ60649 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.02□□□□□ -0.33
ClpbQ60649 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.02□□□□□ -0.33
ClpbQ60649 Gm19220-201ENSMUST00000222682 803 ntBASIC13.02□□□□□ -0.33
ClpbQ60649 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClpbQ60649 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ClpbQ60649 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ClpbQ60649 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClpbQ60649 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ClpbQ60649 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.02□□□□□ -0.33
ClpbQ60649 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClpbQ60649 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ClpbQ60649 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ClpbQ60649 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms