Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.94□□□□□ -0.34
Nr1h4Q60641 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.93□□□□□ -0.34
Nr1h4Q60641 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Nr1h4Q60641 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.93□□□□□ -0.34
Nr1h4Q60641 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Gm15467-201ENSMUST00000120582 445 ntBASIC12.93□□□□□ -0.34
Nr1h4Q60641 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Gm9719-201ENSMUST00000162765 543 ntBASIC12.93□□□□□ -0.34
Nr1h4Q60641 Gm27494-201ENSMUST00000184735 189 ntBASIC12.93□□□□□ -0.34
Nr1h4Q60641 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.93□□□□□ -0.34
Nr1h4Q60641 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nr1h4Q60641 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nr1h4Q60641 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Mir1895-201ENSMUST00000122615 79 ntBASIC12.92□□□□□ -0.34
Nr1h4Q60641 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Gm18889-201ENSMUST00000174284 929 ntBASIC12.92□□□□□ -0.34
Nr1h4Q60641 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.92□□□□□ -0.34
Nr1h4Q60641 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Nr1h4Q60641 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Nr1h4Q60641 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nr1h4Q60641 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nr1h4Q60641 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nr1h4Q60641 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nr1h4Q60641 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nr1h4Q60641 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nr1h4Q60641 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nr1h4Q60641 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nr1h4Q60641 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nr1h4Q60641 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.91□□□□□ -0.34
Nr1h4Q60641 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms