Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Gm38144-201ENSMUST00000192790 465 ntBASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Gm5186-201ENSMUST00000218781 920 ntBASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Gm26315-201ENSMUST00000083890 321 ntBASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Gm5356-201ENSMUST00000093326 615 ntBASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.26■□□□□ 0.19
Vps54Q5SPW0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Gm8602-201ENSMUST00000184045 607 ntBASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Gm27892-201ENSMUST00000185017 106 ntBASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Gm7287-201ENSMUST00000205267 602 ntBASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps54Q5SPW0 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps54Q5SPW0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Vps54Q5SPW0 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms