Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Gm25990-201ENSMUST00000102440 86 ntBASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Rps4l-201ENSMUST00000071745 943 ntBASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3-3Q5R1C3 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3-3Q5R1C3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms