Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.16■□□□□ 0.18
Rnf20Q5DTM8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf20Q5DTM8 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Gm14057-201ENSMUST00000120631 482 ntBASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Syt7-204ENSMUST00000223586 1344 ntBASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf20Q5DTM8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf20Q5DTM8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf20Q5DTM8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms