Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.43□□□□□ -0.26
Scn2bQ56A07 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Auts2-212ENSMUST00000178555 309 ntBASIC13.43□□□□□ -0.26
Scn2bQ56A07 Mir7023-201ENSMUST00000185093 64 ntBASIC13.43□□□□□ -0.26
Scn2bQ56A07 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.43□□□□□ -0.26
Scn2bQ56A07 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.43□□□□□ -0.26
Scn2bQ56A07 Gm44344-201ENSMUST00000200287 129 ntBASIC13.43□□□□□ -0.26
Scn2bQ56A07 Gm44719-201ENSMUST00000206404 149 ntBASIC13.43□□□□□ -0.26
Scn2bQ56A07 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Gm18041-201ENSMUST00000218210 618 ntBASIC13.43□□□□□ -0.26
Scn2bQ56A07 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Shd-206ENSMUST00000225145 998 ntBASIC13.43□□□□□ -0.26
Scn2bQ56A07 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Scn2bQ56A07 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.42□□□□□ -0.26
Scn2bQ56A07 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Mir698-201ENSMUST00000102164 109 ntBASIC13.42□□□□□ -0.26
Scn2bQ56A07 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Gm15653-201ENSMUST00000119247 907 ntBASIC13.42□□□□□ -0.26
Scn2bQ56A07 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Scn2bQ56A07 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn2bQ56A07 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.41□□□□□ -0.26
Scn2bQ56A07 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn2bQ56A07 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn2bQ56A07 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn2bQ56A07 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn2bQ56A07 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn2bQ56A07 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Scn2bQ56A07 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn2bQ56A07 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn2bQ56A07 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn2bQ56A07 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn2bQ56A07 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn2bQ56A07 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn2bQ56A07 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Scn2bQ56A07 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn2bQ56A07 Gm13223-201ENSMUST00000118609 747 ntBASIC13.41□□□□□ -0.26
Scn2bQ56A07 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.41□□□□□ -0.26
Scn2bQ56A07 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn2bQ56A07 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.41□□□□□ -0.26
Scn2bQ56A07 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms