Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shank3Q4ACU6 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shank3Q4ACU6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Shank3Q4ACU6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shank3Q4ACU6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shank3Q4ACU6 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Shank3Q4ACU6 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Shank3Q4ACU6 Gm8566-201ENSMUST00000120174 465 ntBASIC16.46■□□□□ 0.23
Shank3Q4ACU6 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC16.46■□□□□ 0.23
Shank3Q4ACU6 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC16.46■□□□□ 0.23
Shank3Q4ACU6 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shank3Q4ACU6 Gm39404-201ENSMUST00000216350 313 ntBASIC16.46■□□□□ 0.23
Shank3Q4ACU6 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Shank3Q4ACU6 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Shank3Q4ACU6 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC16.46■□□□□ 0.23
Shank3Q4ACU6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Shank3Q4ACU6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Shank3Q4ACU6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Shank3Q4ACU6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Shank3Q4ACU6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Gm26361-201ENSMUST00000158868 186 ntBASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Gm37835-201ENSMUST00000193305 361 ntBASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Gm37666-201ENSMUST00000194110 866 ntBASIC16.45■□□□□ 0.22
Shank3Q4ACU6 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Gm23363-201ENSMUST00000175024 79 ntBASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Mir7221-201ENSMUST00000184009 72 ntBASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Gm5051-201ENSMUST00000204085 485 ntBASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Gm5904-201ENSMUST00000210286 865 ntBASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shank3Q4ACU6 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shank3Q4ACU6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.43■□□□□ 0.22
Shank3Q4ACU6 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shank3Q4ACU6 Gm13813-201ENSMUST00000120998 787 ntBASIC16.43■□□□□ 0.22
Shank3Q4ACU6 Gm7003-201ENSMUST00000195089 312 ntBASIC16.43■□□□□ 0.22
Shank3Q4ACU6 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC16.43■□□□□ 0.22
Shank3Q4ACU6 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.43■□□□□ 0.22
Shank3Q4ACU6 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shank3Q4ACU6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Shank3Q4ACU6 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Shank3Q4ACU6 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shank3Q4ACU6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Shank3Q4ACU6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Shank3Q4ACU6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shank3Q4ACU6 AC126444.1-201ENSMUST00000225938 1768 ntBASIC16.43■□□□□ 0.22
Shank3Q4ACU6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shank3Q4ACU6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.43■□□□□ 0.22
Shank3Q4ACU6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms