Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SfswapQ3USH5 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SfswapQ3USH5 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SfswapQ3USH5 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SfswapQ3USH5 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SfswapQ3USH5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SfswapQ3USH5 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SfswapQ3USH5 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SfswapQ3USH5 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SfswapQ3USH5 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SfswapQ3USH5 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SfswapQ3USH5 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.14■□□□□ 0.18
SfswapQ3USH5 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SfswapQ3USH5 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SfswapQ3USH5 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Gm14660-201ENSMUST00000119809 575 ntBASIC16.14■□□□□ 0.17
SfswapQ3USH5 Proscos-202ENSMUST00000178990 666 ntBASIC16.14■□□□□ 0.17
SfswapQ3USH5 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Gm38144-201ENSMUST00000192790 465 ntBASIC16.14■□□□□ 0.17
SfswapQ3USH5 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.14■□□□□ 0.17
SfswapQ3USH5 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfswapQ3USH5 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Gm40466-201ENSMUST00000212174 422 ntBASIC16.13■□□□□ 0.17
SfswapQ3USH5 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.13■□□□□ 0.17
SfswapQ3USH5 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfswapQ3USH5 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.12■□□□□ 0.17
SfswapQ3USH5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.12■□□□□ 0.17
SfswapQ3USH5 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfswapQ3USH5 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.12■□□□□ 0.17
SfswapQ3USH5 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms