Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Shisa3Q3UPR0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Shisa3Q3UPR0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Gm25287-201ENSMUST00000103846 110 ntBASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Gm22918-201ENSMUST00000103855 110 ntBASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shisa3Q3UPR0 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shisa3Q3UPR0 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.71□□□□□ -0.54
Shisa3Q3UPR0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shisa3Q3UPR0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shisa3Q3UPR0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shisa3Q3UPR0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Shisa3Q3UPR0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Shisa3Q3UPR0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Shisa3Q3UPR0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Shisa3Q3UPR0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.71□□□□□ -0.54
Shisa3Q3UPR0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shisa3Q3UPR0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shisa3Q3UPR0 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.71□□□□□ -0.54
Shisa3Q3UPR0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shisa3Q3UPR0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shisa3Q3UPR0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Shisa3Q3UPR0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shisa3Q3UPR0 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms