Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Gm17795-201ENSMUST00000214505 757 ntBASIC12.78□□□□□ -0.36
Brf2Q3UAW9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Brf2Q3UAW9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Brf2Q3UAW9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.77□□□□□ -0.36
Brf2Q3UAW9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Brf2Q3UAW9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Brf2Q3UAW9 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Brf2Q3UAW9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Brf2Q3UAW9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Brf2Q3UAW9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Brf2Q3UAW9 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.77□□□□□ -0.36
Brf2Q3UAW9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Brf2Q3UAW9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Brf2Q3UAW9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Brf2Q3UAW9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Brf2Q3UAW9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.77□□□□□ -0.37
Brf2Q3UAW9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Brf2Q3UAW9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Brf2Q3UAW9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms