Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.78□□□□□ -0.52
Q3U1D9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Q3U1D9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Q3U1D9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Q3U1D9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Q3U1D9 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.77□□□□□ -0.52
Q3U1D9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.77□□□□□ -0.52
Q3U1D9 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.77□□□□□ -0.52
Q3U1D9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Q3U1D9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.77□□□□□ -0.52
Q3U1D9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Q3U1D9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Q3U1D9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Q3U1D9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.77□□□□□ -0.53
Q3U1D9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.77□□□□□ -0.53
Q3U1D9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.77□□□□□ -0.53
Q3U1D9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.77□□□□□ -0.53
Q3U1D9 Gm24196-201ENSMUST00000179161 110 ntBASIC11.77□□□□□ -0.53
Q3U1D9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.77□□□□□ -0.53
Q3U1D9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.77□□□□□ -0.53
Q3U1D9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 Gm6091-201ENSMUST00000098307 165 ntBASIC11.77□□□□□ -0.53
Q3U1D9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Q3U1D9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.77□□□□□ -0.53
Q3U1D9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.77□□□□□ -0.53
Q3U1D9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Q3U1D9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.77□□□□□ -0.53
Q3U1D9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Q3U1D9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Q3U1D9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.76□□□□□ -0.53
Q3U1D9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Q3U1D9 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.76□□□□□ -0.53
Q3U1D9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Q3U1D9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Q3U1D9 Gm45784-201ENSMUST00000188360 142 ntBASIC11.76□□□□□ -0.53
Q3U1D9 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.76□□□□□ -0.53
Q3U1D9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.76□□□□□ -0.53
Q3U1D9 Gm7561-201ENSMUST00000211203 886 ntBASIC11.76□□□□□ -0.53
Q3U1D9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.76□□□□□ -0.53
Q3U1D9 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.76□□□□□ -0.53
Q3U1D9 Gm26315-201ENSMUST00000083890 321 ntBASIC11.76□□□□□ -0.53
Q3U1D9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Q3U1D9 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Q3U1D9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Q3U1D9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Q3U1D9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.75□□□□□ -0.53
Q3U1D9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms