Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Gm8396-201ENSMUST00000057361 823 ntBASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cul4aQ3TCH7 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Gm15770-201ENSMUST00000117498 584 ntBASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Gm3436-201ENSMUST00000179930 840 ntBASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Gm2756-201ENSMUST00000195851 400 ntBASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cul4aQ3TCH7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cul4aQ3TCH7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms