Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Tff1Q08423 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.29□□□□□ -0.6
Tff1Q08423 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Tff1Q08423 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Tff1Q08423 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.29□□□□□ -0.6
Tff1Q08423 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Tff1Q08423 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.29□□□□□ -0.6
Tff1Q08423 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Tff1Q08423 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Gm7488-201ENSMUST00000117148 684 ntBASIC11.29□□□□□ -0.6
Tff1Q08423 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.29□□□□□ -0.6
Tff1Q08423 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.29□□□□□ -0.6
Tff1Q08423 Gm44855-201ENSMUST00000205725 362 ntBASIC11.29□□□□□ -0.6
Tff1Q08423 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.29□□□□□ -0.6
Tff1Q08423 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.29□□□□□ -0.6
Tff1Q08423 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Tff1Q08423 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Tff1Q08423 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Tff1Q08423 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Tff1Q08423 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Tff1Q08423 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Tff1Q08423 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.28□□□□□ -0.6
Tff1Q08423 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.28□□□□□ -0.6
Tff1Q08423 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Tff1Q08423 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Tff1Q08423 Gm25144-201ENSMUST00000179561 110 ntBASIC11.28□□□□□ -0.6
Tff1Q08423 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Tff1Q08423 Gm25352-201ENSMUST00000179815 110 ntBASIC11.28□□□□□ -0.6
Tff1Q08423 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.28□□□□□ -0.6
Tff1Q08423 Gm27631-201ENSMUST00000184163 466 ntBASIC11.28□□□□□ -0.6
Tff1Q08423 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC11.28□□□□□ -0.6
Tff1Q08423 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Tff1Q08423 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Mir125a-201ENSMUST00000083545 68 ntBASIC11.28□□□□□ -0.6
Tff1Q08423 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Tff1Q08423 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 BC001981-202ENSMUST00000191393 1545 ntBASIC11.28□□□□□ -0.6
Tff1Q08423 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.28□□□□□ -0.6
Tff1Q08423 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.28□□□□□ -0.6
Tff1Q08423 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Tff1Q08423 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tff1Q08423 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.28□□□□□ -0.6
Tff1Q08423 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Tff1Q08423 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tff1Q08423 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Tff1Q08423 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms