Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Thbs3Q05895 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Gm7488-201ENSMUST00000117148 684 ntBASIC11.91□□□□□ -0.5
Thbs3Q05895 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.91□□□□□ -0.5
Thbs3Q05895 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.91□□□□□ -0.5
Thbs3Q05895 Gm26464-201ENSMUST00000157094 305 ntBASIC11.91□□□□□ -0.5
Thbs3Q05895 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Thbs3Q05895 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.91□□□□□ -0.5
Thbs3Q05895 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.91□□□□□ -0.5
Thbs3Q05895 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.91□□□□□ -0.5
Thbs3Q05895 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Thbs3Q05895 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Thbs3Q05895 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Gm5161-201ENSMUST00000075243 853 ntBASIC11.91□□□□□ -0.5
Thbs3Q05895 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.91□□□□□ -0.5
Thbs3Q05895 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Thbs3Q05895 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.91□□□□□ -0.5
Thbs3Q05895 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.91□□□□□ -0.5
Thbs3Q05895 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Thbs3Q05895 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Thbs3Q05895 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Thbs3Q05895 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Thbs3Q05895 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Thbs3Q05895 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.9□□□□□ -0.5
Thbs3Q05895 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.9□□□□□ -0.5
Thbs3Q05895 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.9□□□□□ -0.5
Thbs3Q05895 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Thbs3Q05895 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Thbs3Q05895 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Thbs3Q05895 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.9□□□□□ -0.5
Thbs3Q05895 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Thbs3Q05895 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Thbs3Q05895 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Thbs3Q05895 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
Thbs3Q05895 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Thbs3Q05895 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Thbs3Q05895 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Thbs3Q05895 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Thbs3Q05895 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Thbs3Q05895 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Thbs3Q05895 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.89□□□□□ -0.51
Thbs3Q05895 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.89□□□□□ -0.51
Thbs3Q05895 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Thbs3Q05895 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Thbs3Q05895 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.89□□□□□ -0.51
Thbs3Q05895 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.89□□□□□ -0.51
Thbs3Q05895 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms