Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.96□□□□□ -0.17
Sox9Q04887 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sox9Q04887 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Sox9Q04887 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.96□□□□□ -0.17
Sox9Q04887 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Sox9Q04887 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.96□□□□□ -0.17
Sox9Q04887 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.96□□□□□ -0.17
Sox9Q04887 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.96□□□□□ -0.17
Sox9Q04887 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sox9Q04887 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox9Q04887 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox9Q04887 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox9Q04887 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox9Q04887 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.96□□□□□ -0.18
Sox9Q04887 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Sox9Q04887 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox9Q04887 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox9Q04887 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sox9Q04887 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.95□□□□□ -0.18
Sox9Q04887 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox9Q04887 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sox9Q04887 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.95□□□□□ -0.18
Sox9Q04887 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.95□□□□□ -0.18
Sox9Q04887 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.95□□□□□ -0.18
Sox9Q04887 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.95□□□□□ -0.18
Sox9Q04887 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.95□□□□□ -0.18
Sox9Q04887 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
Sox9Q04887 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox9Q04887 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox9Q04887 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Sox9Q04887 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.95□□□□□ -0.18
Sox9Q04887 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sox9Q04887 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox9Q04887 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox9Q04887 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox9Q04887 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox9Q04887 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sox9Q04887 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox9Q04887 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox9Q04887 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox9Q04887 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Sox9Q04887 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox9Q04887 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox9Q04887 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox9Q04887 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox9Q04887 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox9Q04887 Gm11331-201ENSMUST00000119764 288 ntBASIC13.94□□□□□ -0.18
Sox9Q04887 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox9Q04887 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox9Q04887 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox9Q04887 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox9Q04887 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox9Q04887 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox9Q04887 Gm30285-201ENSMUST00000214614 422 ntBASIC13.94□□□□□ -0.18
Sox9Q04887 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox9Q04887 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.94□□□□□ -0.18
Sox9Q04887 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.94□□□□□ -0.18
Sox9Q04887 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox9Q04887 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox9Q04887 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox9Q04887 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox9Q04887 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.94□□□□□ -0.18
Sox9Q04887 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms