Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col6a1Q04857 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Col6a1Q04857 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.96□□□□□ -0.01
Col6a1Q04857 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.96□□□□□ -0.01
Col6a1Q04857 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.96□□□□□ -0.01
Col6a1Q04857 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.96□□□□□ -0.01
Col6a1Q04857 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.96□□□□□ -0.01
Col6a1Q04857 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.96□□□□□ -0.01
Col6a1Q04857 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.96□□□□□ -0.01
Col6a1Q04857 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col6a1Q04857 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col6a1Q04857 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col6a1Q04857 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col6a1Q04857 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col6a1Q04857 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col6a1Q04857 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col6a1Q04857 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.95□□□□□ -0.02
Col6a1Q04857 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Col6a1Q04857 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.95□□□□□ -0.02
Col6a1Q04857 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col6a1Q04857 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Col6a1Q04857 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.95□□□□□ -0.02
Col6a1Q04857 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col6a1Q04857 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Gm12241-201ENSMUST00000118330 726 ntBASIC14.95□□□□□ -0.02
Col6a1Q04857 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Col6a1Q04857 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.95□□□□□ -0.02
Col6a1Q04857 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.95□□□□□ -0.02
Col6a1Q04857 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.95□□□□□ -0.02
Col6a1Q04857 Gm6334-201ENSMUST00000207083 228 ntBASIC14.95□□□□□ -0.02
Col6a1Q04857 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col6a1Q04857 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Col6a1Q04857 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col6a1Q04857 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a1Q04857 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a1Q04857 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.94□□□□□ -0.02
Col6a1Q04857 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a1Q04857 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a1Q04857 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a1Q04857 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a1Q04857 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a1Q04857 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a1Q04857 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a1Q04857 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a1Q04857 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a1Q04857 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a1Q04857 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Col6a1Q04857 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Col6a1Q04857 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a1Q04857 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a1Q04857 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Col6a1Q04857 Gm12176-201ENSMUST00000121420 875 ntBASIC14.94□□□□□ -0.02
Col6a1Q04857 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.94□□□□□ -0.02
Col6a1Q04857 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.94□□□□□ -0.02
Col6a1Q04857 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col6a1Q04857 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a1Q04857 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Col6a1Q04857 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.94□□□□□ -0.02
Col6a1Q04857 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.94□□□□□ -0.02
Col6a1Q04857 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.94□□□□□ -0.02
Col6a1Q04857 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a1Q04857 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col6a1Q04857 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms