Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a2Q01149 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Col1a2Q01149 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.85■□□□□ 0.29
Col1a2Q01149 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.85■□□□□ 0.29
Col1a2Q01149 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Col1a2Q01149 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.85■□□□□ 0.29
Col1a2Q01149 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.85■□□□□ 0.29
Col1a2Q01149 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Col1a2Q01149 Gm6222-202ENSMUST00000182143 629 ntBASIC16.85■□□□□ 0.29
Col1a2Q01149 Mir8109-201ENSMUST00000184375 117 ntBASIC16.85■□□□□ 0.29
Col1a2Q01149 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.85■□□□□ 0.29
Col1a2Q01149 Gm43179-201ENSMUST00000198797 275 ntBASIC16.85■□□□□ 0.29
Col1a2Q01149 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a2Q01149 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a2Q01149 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Col1a2Q01149 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a2Q01149 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a2Q01149 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a2Q01149 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a2Q01149 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a2Q01149 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a2Q01149 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a2Q01149 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC16.84■□□□□ 0.29
Col1a2Q01149 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a2Q01149 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.84■□□□□ 0.29
Col1a2Q01149 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Col1a2Q01149 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a2Q01149 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a2Q01149 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a2Q01149 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Col1a2Q01149 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a2Q01149 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a2Q01149 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a2Q01149 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.84■□□□□ 0.29
Col1a2Q01149 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Col1a2Q01149 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Col1a2Q01149 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a2Q01149 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Col1a2Q01149 Gm11793-201ENSMUST00000120433 981 ntBASIC16.84■□□□□ 0.29
Col1a2Q01149 Gm12363-201ENSMUST00000122250 668 ntBASIC16.84■□□□□ 0.29
Col1a2Q01149 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC16.84■□□□□ 0.29
Col1a2Q01149 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a2Q01149 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Col1a2Q01149 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC16.84■□□□□ 0.29
Col1a2Q01149 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a2Q01149 n-R5s195-201ENSMUST00000082891 119 ntBASIC16.84■□□□□ 0.29
Col1a2Q01149 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a2Q01149 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a2Q01149 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a2Q01149 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col1a2Q01149 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Col1a2Q01149 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col1a2Q01149 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col1a2Q01149 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col1a2Q01149 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
Col1a2Q01149 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col1a2Q01149 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col1a2Q01149 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col1a2Q01149 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Col1a2Q01149 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col1a2Q01149 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col1a2Q01149 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col1a2Q01149 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.83■□□□□ 0.29
Col1a2Q01149 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Col1a2Q01149 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC16.83■□□□□ 0.28
Col1a2Q01149 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col1a2Q01149 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col1a2Q01149 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col1a2Q01149 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC16.83■□□□□ 0.28
Col1a2Q01149 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col1a2Q01149 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.83■□□□□ 0.28
Col1a2Q01149 Gm5850-201ENSMUST00000192923 1206 ntBASIC16.83■□□□□ 0.28
Col1a2Q01149 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC16.83■□□□□ 0.28
Col1a2Q01149 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.83■□□□□ 0.28
Col1a2Q01149 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.83■□□□□ 0.28
Col1a2Q01149 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Col1a2Q01149 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col1a2Q01149 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col1a2Q01149 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col1a2Q01149 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col1a2Q01149 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Col1a2Q01149 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col1a2Q01149 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Col1a2Q01149 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col1a2Q01149 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col1a2Q01149 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Col1a2Q01149 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col1a2Q01149 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col1a2Q01149 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Col1a2Q01149 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col1a2Q01149 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms