Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.84□□□□□ -0.35
Nkx3-2P97503 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.84□□□□□ -0.35
Nkx3-2P97503 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.84□□□□□ -0.35
Nkx3-2P97503 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.84□□□□□ -0.35
Nkx3-2P97503 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.84□□□□□ -0.35
Nkx3-2P97503 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
Nkx3-2P97503 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Nkx3-2P97503 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Mir698-201ENSMUST00000102164 109 ntBASIC12.83□□□□□ -0.36
Nkx3-2P97503 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.83□□□□□ -0.36
Nkx3-2P97503 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Gm26464-201ENSMUST00000157094 305 ntBASIC12.83□□□□□ -0.36
Nkx3-2P97503 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.83□□□□□ -0.36
Nkx3-2P97503 Gm29741-201ENSMUST00000192667 421 ntBASIC12.83□□□□□ -0.36
Nkx3-2P97503 Gm43094-201ENSMUST00000196549 921 ntBASIC12.83□□□□□ -0.36
Nkx3-2P97503 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.83□□□□□ -0.36
Nkx3-2P97503 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.83□□□□□ -0.36
Nkx3-2P97503 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Acot6-202ENSMUST00000222921 3622 ntBASIC12.83□□□□□ -0.36
Nkx3-2P97503 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.83□□□□□ -0.36
Nkx3-2P97503 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nkx3-2P97503 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.82□□□□□ -0.36
Nkx3-2P97503 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Nkx3-2P97503 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Gm17794-201ENSMUST00000220252 955 ntBASIC12.82□□□□□ -0.36
Nkx3-2P97503 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkx3-2P97503 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms