Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
H3f3aP84244 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.08□□□□□ -0.48
H3f3aP84244 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.08□□□□□ -0.48
H3f3aP84244 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.08□□□□□ -0.48
H3f3aP84244 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.08□□□□□ -0.48
H3f3aP84244 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.08□□□□□ -0.48
H3f3aP84244 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.08□□□□□ -0.48
H3f3aP84244 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.08□□□□□ -0.48
H3f3aP84244 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.08□□□□□ -0.48
H3f3aP84244 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.07□□□□□ -0.48
H3f3aP84244 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Mir7654-201ENSMUST00000185082 70 ntBASIC12.07□□□□□ -0.48
H3f3aP84244 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.07□□□□□ -0.48
H3f3aP84244 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.07□□□□□ -0.48
H3f3aP84244 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.07□□□□□ -0.48
H3f3aP84244 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
H3f3aP84244 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
H3f3aP84244 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
H3f3aP84244 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.07□□□□□ -0.48
H3f3aP84244 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.07□□□□□ -0.48
H3f3aP84244 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
H3f3aP84244 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.07□□□□□ -0.48
H3f3aP84244 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
H3f3aP84244 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.06□□□□□ -0.48
H3f3aP84244 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
H3f3aP84244 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.06□□□□□ -0.48
H3f3aP84244 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Mir6392-201ENSMUST00000184924 108 ntBASIC12.06□□□□□ -0.48
H3f3aP84244 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
H3f3aP84244 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.06□□□□□ -0.48
H3f3aP84244 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
H3f3aP84244 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms