Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb1P63158 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Hmgb1P63158 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.96□□□□□ -0.01
Hmgb1P63158 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Hmgb1P63158 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.96□□□□□ -0.01
Hmgb1P63158 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Hmgb1P63158 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Hmgb1P63158 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Hmgb1P63158 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Hmgb1P63158 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb1P63158 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb1P63158 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Hmgb1P63158 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb1P63158 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb1P63158 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb1P63158 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb1P63158 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Hmgb1P63158 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb1P63158 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Hmgb1P63158 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb1P63158 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb1P63158 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb1P63158 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb1P63158 Gm27618-201ENSMUST00000183671 60 ntBASIC14.95□□□□□ -0.02
Hmgb1P63158 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.95□□□□□ -0.02
Hmgb1P63158 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb1P63158 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb1P63158 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Hmgb1P63158 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb1P63158 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb1P63158 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Hmgb1P63158 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.95□□□□□ -0.02
Hmgb1P63158 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Hmgb1P63158 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.94□□□□□ -0.02
Hmgb1P63158 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Hmgb1P63158 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.94□□□□□ -0.02
Hmgb1P63158 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Hmgb1P63158 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Gm43703-201ENSMUST00000200523 763 ntBASIC14.94□□□□□ -0.02
Hmgb1P63158 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.94□□□□□ -0.02
Hmgb1P63158 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Hmgb1P63158 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.94□□□□□ -0.02
Hmgb1P63158 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Hmgb1P63158 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Hmgb1P63158 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.93□□□□□ -0.02
Hmgb1P63158 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb1P63158 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb1P63158 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Hmgb1P63158 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb1P63158 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.93□□□□□ -0.02
Hmgb1P63158 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.93□□□□□ -0.02
Hmgb1P63158 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb1P63158 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb1P63158 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Hmgb1P63158 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.93□□□□□ -0.02
Hmgb1P63158 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb1P63158 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.93□□□□□ -0.02
Hmgb1P63158 Gm6888-201ENSMUST00000221983 706 ntBASIC14.93□□□□□ -0.02
Hmgb1P63158 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.93□□□□□ -0.02
Hmgb1P63158 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb1P63158 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb1P63158 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb1P63158 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb1P63158 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb1P63158 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb1P63158 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb1P63158 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb1P63158 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb1P63158 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.93□□□□□ -0.02
Hmgb1P63158 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Hmgb1P63158 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.92□□□□□ -0.02
Hmgb1P63158 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Hmgb1P63158 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Hmgb1P63158 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Hmgb1P63158 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hmgb1P63158 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms