Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Sec61a1P61620 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sec61a1P61620 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61a1P61620 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sec61a1P61620 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sec61a1P61620 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Gm12151-201ENSMUST00000121374 290 ntBASIC11.97□□□□□ -0.49
Sec61a1P61620 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.97□□□□□ -0.49
Sec61a1P61620 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Sec61a1P61620 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Gm6888-201ENSMUST00000221983 706 ntBASIC11.97□□□□□ -0.49
Sec61a1P61620 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.97□□□□□ -0.49
Sec61a1P61620 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.97□□□□□ -0.49
Sec61a1P61620 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sec61a1P61620 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.97□□□□□ -0.49
Sec61a1P61620 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sec61a1P61620 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sec61a1P61620 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61a1P61620 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.96□□□□□ -0.49
Sec61a1P61620 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Sec61a1P61620 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.96□□□□□ -0.49
Sec61a1P61620 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.96□□□□□ -0.49
Sec61a1P61620 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.96□□□□□ -0.49
Sec61a1P61620 Gm37230-201ENSMUST00000194491 818 ntBASIC11.96□□□□□ -0.49
Sec61a1P61620 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sec61a1P61620 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.96□□□□□ -0.49
Sec61a1P61620 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61a1P61620 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sec61a1P61620 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
Sec61a1P61620 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sec61a1P61620 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sec61a1P61620 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.96□□□□□ -0.5
Sec61a1P61620 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sec61a1P61620 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sec61a1P61620 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sec61a1P61620 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sec61a1P61620 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sec61a1P61620 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sec61a1P61620 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sec61a1P61620 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sec61a1P61620 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sec61a1P61620 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sec61a1P61620 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.95□□□□□ -0.5
Sec61a1P61620 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sec61a1P61620 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sec61a1P61620 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sec61a1P61620 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms