Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.12■□□□□ 0.01
Tpm1P58771 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.12■□□□□ 0.01
Tpm1P58771 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.12■□□□□ 0.01
Tpm1P58771 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.12■□□□□ 0.01
Tpm1P58771 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.12■□□□□ 0.01
Tpm1P58771 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.12■□□□□ 0.01
Tpm1P58771 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.12■□□□□ 0.01
Tpm1P58771 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.12■□□□□ 0.01
Tpm1P58771 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Tpm1P58771 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.12■□□□□ 0.01
Tpm1P58771 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Tpm1P58771 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Tpm1P58771 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Tpm1P58771 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Tpm1P58771 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Tpm1P58771 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.11■□□□□ 0.01
Tpm1P58771 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.11■□□□□ 0.01
Tpm1P58771 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.11■□□□□ 0.01
Tpm1P58771 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.11■□□□□ 0.01
Tpm1P58771 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.11■□□□□ 0.01
Tpm1P58771 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tpm1P58771 Gm18057-201ENSMUST00000208220 503 ntBASIC15.11■□□□□ 0.01
Tpm1P58771 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.11■□□□□ 0.01
Tpm1P58771 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Tpm1P58771 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Tpm1P58771 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tpm1P58771 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tpm1P58771 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Tpm1P58771 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tpm1P58771 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpm1P58771 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tpm1P58771 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpm1P58771 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Tpm1P58771 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpm1P58771 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpm1P58771 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpm1P58771 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpm1P58771 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Tpm1P58771 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Tpm1P58771 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tpm1P58771 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpm1P58771 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.1■□□□□ 0.01
Tpm1P58771 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.1■□□□□ 0.01
Tpm1P58771 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Tpm1P58771 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpm1P58771 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpm1P58771 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpm1P58771 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpm1P58771 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpm1P58771 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.1■□□□□ 0.01
Tpm1P58771 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Tpm1P58771 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tpm1P58771 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Tpm1P58771 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.09■□□□□ 0.01
Tpm1P58771 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.09■□□□□ 0.01
Tpm1P58771 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tpm1P58771 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms