Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.56□□□□□ -0.72
Ctdsp1P58466 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ctdsp1P58466 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.55□□□□□ -0.72
Ctdsp1P58466 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Gm12882-201ENSMUST00000121696 517 ntBASIC10.55□□□□□ -0.72
Ctdsp1P58466 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Gm44608-201ENSMUST00000206827 855 ntBASIC10.55□□□□□ -0.72
Ctdsp1P58466 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.55□□□□□ -0.72
Ctdsp1P58466 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ctdsp1P58466 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.54□□□□□ -0.72
Ctdsp1P58466 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.54□□□□□ -0.72
Ctdsp1P58466 AC154471.1-201ENSMUST00000224418 436 ntBASIC10.54□□□□□ -0.72
Ctdsp1P58466 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.54□□□□□ -0.72
Ctdsp1P58466 AC123645.1-201ENSMUST00000228469 605 ntBASIC10.54□□□□□ -0.72
Ctdsp1P58466 CT030704.2-201ENSMUST00000228887 494 ntBASIC10.54□□□□□ -0.72
Ctdsp1P58466 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ctdsp1P58466 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms