Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.39□□□□□ -0.43
Cdh11P55288 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Cdh11P55288 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cdh11P55288 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdh11P55288 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh11P55288 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.38□□□□□ -0.43
Cdh11P55288 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Cdh11P55288 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Cdh11P55288 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Cdh11P55288 Gm29310-201ENSMUST00000185468 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm21825-201ENSMUST00000185728 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm29109-201ENSMUST00000185895 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm21896-201ENSMUST00000186520 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm21873-201ENSMUST00000186728 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm21794-201ENSMUST00000187056 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm21880-201ENSMUST00000187275 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm21826-201ENSMUST00000187451 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm21198-201ENSMUST00000188393 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm21749-201ENSMUST00000189343 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm21901-201ENSMUST00000189568 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm29424-201ENSMUST00000189716 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm28599-201ENSMUST00000189838 694 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm21867-201ENSMUST00000189917 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm29269-201ENSMUST00000190087 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm21722-201ENSMUST00000190153 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm28423-201ENSMUST00000190701 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm21899-201ENSMUST00000190745 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm21910-201ENSMUST00000191163 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm21849-201ENSMUST00000191571 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm28678-201ENSMUST00000191593 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm20910-201ENSMUST00000193268 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gm21871-201ENSMUST00000194621 696 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdh11P55288 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.38□□□□□ -0.43
Cdh11P55288 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdh11P55288 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Cdh11P55288 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdh11P55288 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cdh11P55288 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cdh11P55288 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cdh11P55288 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.37□□□□□ -0.43
Cdh11P55288 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.37□□□□□ -0.43
Cdh11P55288 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdh11P55288 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.37□□□□□ -0.43
Cdh11P55288 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.37□□□□□ -0.43
Cdh11P55288 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.37□□□□□ -0.43
Cdh11P55288 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdh11P55288 Gm9063-201ENSMUST00000223299 582 ntBASIC12.37□□□□□ -0.43
Cdh11P55288 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cdh11P55288 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.37□□□□□ -0.43
Cdh11P55288 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdh11P55288 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms