Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC17.06■□□□□ 0.32
Msh6P54276 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Gm11658-201ENSMUST00000120913 1008 ntBASIC17.06■□□□□ 0.32
Msh6P54276 Mir3547-201ENSMUST00000175461 88 ntBASIC17.06■□□□□ 0.32
Msh6P54276 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Gm2467-201ENSMUST00000182266 1010 ntBASIC17.06■□□□□ 0.32
Msh6P54276 Gm6981-201ENSMUST00000182467 1008 ntBASIC17.06■□□□□ 0.32
Msh6P54276 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Msh6P54276 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC17.06■□□□□ 0.32
Msh6P54276 Gm38000-201ENSMUST00000192390 1215 ntBASIC17.06■□□□□ 0.32
Msh6P54276 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Msh6P54276 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Gm14752-201ENSMUST00000120719 2075 ntBASIC17.06■□□□□ 0.32
Msh6P54276 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.06■□□□□ 0.32
Msh6P54276 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.06■□□□□ 0.32
Msh6P54276 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Msh6P54276 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC17.06■□□□□ 0.32
Msh6P54276 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh6P54276 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.06■□□□□ 0.32
Msh6P54276 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Msh6P54276 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.05■□□□□ 0.32
Msh6P54276 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Gm24255-201ENSMUST00000104481 128 ntBASIC17.05■□□□□ 0.32
Msh6P54276 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Msh6P54276 Gm6447-201ENSMUST00000118905 835 ntBASIC17.05■□□□□ 0.32
Msh6P54276 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC17.05■□□□□ 0.32
Msh6P54276 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC17.05■□□□□ 0.32
Msh6P54276 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
Msh6P54276 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC17.05■□□□□ 0.32
Msh6P54276 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Msh6P54276 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Msh6P54276 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC17.05■□□□□ 0.32
Msh6P54276 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Gm5639-201ENSMUST00000122305 2403 ntBASIC17.05■□□□□ 0.32
Msh6P54276 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Msh6P54276 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Msh6P54276 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.05■□□□□ 0.32
Msh6P54276 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC17.05■□□□□ 0.32
Msh6P54276 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Msh6P54276 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Msh6P54276 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh6P54276 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Msh6P54276 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC17.04■□□□□ 0.32
Msh6P54276 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Msh6P54276 Gm7118-201ENSMUST00000200167 1003 ntBASIC17.04■□□□□ 0.32
Msh6P54276 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh6P54276 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh6P54276 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh6P54276 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh6P54276 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Msh6P54276 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Msh6P54276 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.04■□□□□ 0.32
Msh6P54276 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Msh6P54276 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh6P54276 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh6P54276 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh6P54276 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh6P54276 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC17.04■□□□□ 0.32
Msh6P54276 Abhd6-203ENSMUST00000225234 1958 ntBASIC17.04■□□□□ 0.32
Msh6P54276 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh6P54276 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Msh6P54276 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Msh6P54276 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms