Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cux1P53564 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC20.5■□□□□ 0.87
Cux1P53564 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC20.5■□□□□ 0.87
Cux1P53564 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cux1P53564 Gm25732-201ENSMUST00000175168 60 ntBASIC20.5■□□□□ 0.87
Cux1P53564 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC20.5■□□□□ 0.87
Cux1P53564 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC20.5■□□□□ 0.87
Cux1P53564 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cux1P53564 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cux1P53564 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cux1P53564 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cux1P53564 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cux1P53564 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cux1P53564 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cux1P53564 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cux1P53564 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC20.49■□□□□ 0.87
Cux1P53564 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cux1P53564 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cux1P53564 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cux1P53564 Gm4760-201ENSMUST00000119663 1030 ntBASIC20.49■□□□□ 0.87
Cux1P53564 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cux1P53564 Gm27341-201ENSMUST00000183570 106 ntBASIC20.49■□□□□ 0.87
Cux1P53564 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC20.49■□□□□ 0.87
Cux1P53564 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC20.49■□□□□ 0.87
Cux1P53564 AC135669.1-202ENSMUST00000216742 540 ntBASIC20.49■□□□□ 0.87
Cux1P53564 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cux1P53564 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cux1P53564 Gm5466-201ENSMUST00000119395 1890 ntBASIC20.49■□□□□ 0.87
Cux1P53564 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cux1P53564 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cux1P53564 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cux1P53564 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cux1P53564 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC20.49■□□□□ 0.87
Cux1P53564 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux1P53564 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux1P53564 Gm14208-201ENSMUST00000119645 678 ntBASIC20.48■□□□□ 0.87
Cux1P53564 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux1P53564 Gm13570-201ENSMUST00000140763 309 ntBASIC20.48■□□□□ 0.87
Cux1P53564 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
Cux1P53564 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cux1P53564 Gm5950-201ENSMUST00000213337 772 ntBASIC20.48■□□□□ 0.87
Cux1P53564 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC20.48■□□□□ 0.87
Cux1P53564 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux1P53564 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux1P53564 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cux1P53564 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cux1P53564 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cux1P53564 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux1P53564 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cux1P53564 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux1P53564 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cux1P53564 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux1P53564 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Cux1P53564 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cux1P53564 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cux1P53564 Gm2546-201ENSMUST00000182630 991 ntBASIC20.48■□□□□ 0.87
Cux1P53564 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC20.48■□□□□ 0.87
Cux1P53564 Gm18916-201ENSMUST00000198264 1246 ntBASIC20.48■□□□□ 0.87
Cux1P53564 Gm18753-201ENSMUST00000201000 566 ntBASIC20.48■□□□□ 0.87
Cux1P53564 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC20.48■□□□□ 0.87
Cux1P53564 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cux1P53564 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Cux1P53564 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Cux1P53564 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux1P53564 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux1P53564 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux1P53564 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux1P53564 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux1P53564 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC20.47■□□□□ 0.87
Cux1P53564 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cux1P53564 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux1P53564 Gm37736-201ENSMUST00000193564 2802 ntBASIC20.47■□□□□ 0.87
Cux1P53564 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux1P53564 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux1P53564 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cux1P53564 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cux1P53564 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC20.47■□□□□ 0.87
Cux1P53564 Gm25043-201ENSMUST00000158604 212 ntBASIC20.47■□□□□ 0.87
Cux1P53564 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux1P53564 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Cux1P53564 Gm37827-201ENSMUST00000194486 1542 ntBASIC20.47■□□□□ 0.87
Cux1P53564 Gm38092-201ENSMUST00000195600 653 ntBASIC20.47■□□□□ 0.87
Cux1P53564 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux1P53564 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cux1P53564 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cux1P53564 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Cux1P53564 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Cux1P53564 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cux1P53564 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux1P53564 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux1P53564 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux1P53564 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux1P53564 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux1P53564 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cux1P53564 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cux1P53564 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cux1P53564 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC20.46■□□□□ 0.87
Cux1P53564 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cux1P53564 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Cux1P53564 Gm31256-201ENSMUST00000194705 506 ntBASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms