Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm15824-201ENSMUST00000119516 955 ntBASIC14.33□□□□□ -0.12
Shmt1P50431 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt1P50431 Gm17150-201ENSMUST00000165577 381 ntBASIC14.33□□□□□ -0.12
Shmt1P50431 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Shmt1P50431 Gm6244-201ENSMUST00000178732 841 ntBASIC14.33□□□□□ -0.12
Shmt1P50431 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.33□□□□□ -0.12
Shmt1P50431 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt1P50431 Gm6266-201ENSMUST00000203844 806 ntBASIC14.33□□□□□ -0.12
Shmt1P50431 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.33□□□□□ -0.12
Shmt1P50431 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.33□□□□□ -0.12
Shmt1P50431 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Shmt1P50431 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt1P50431 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt1P50431 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt1P50431 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt1P50431 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt1P50431 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt1P50431 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt1P50431 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt1P50431 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt1P50431 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shmt1P50431 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.33□□□□□ -0.12
Shmt1P50431 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.33□□□□□ -0.12
Shmt1P50431 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
Shmt1P50431 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.33□□□□□ -0.12
Shmt1P50431 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Shmt1P50431 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.32□□□□□ -0.12
Shmt1P50431 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Shmt1P50431 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.32□□□□□ -0.12
Shmt1P50431 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Mir7085-201ENSMUST00000184353 66 ntBASIC14.32□□□□□ -0.12
Shmt1P50431 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.32□□□□□ -0.12
Shmt1P50431 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Shmt1P50431 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Shmt1P50431 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Shmt1P50431 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.32□□□□□ -0.12
Shmt1P50431 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shmt1P50431 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.31□□□□□ -0.12
Shmt1P50431 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Shmt1P50431 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Shmt1P50431 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Gm15371-201ENSMUST00000117057 784 ntBASIC14.31□□□□□ -0.12
Shmt1P50431 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Gm27892-201ENSMUST00000185017 106 ntBASIC14.31□□□□□ -0.12
Shmt1P50431 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Shmt1P50431 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.31□□□□□ -0.12
Shmt1P50431 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.31□□□□□ -0.12
Shmt1P50431 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.31□□□□□ -0.12
Shmt1P50431 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.31□□□□□ -0.12
Shmt1P50431 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.31□□□□□ -0.12
Shmt1P50431 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shmt1P50431 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms