Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.23□□□□□ -0.61
Nkx2-1P50220 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Gm15427-201ENSMUST00000117288 531 ntBASIC11.23□□□□□ -0.61
Nkx2-1P50220 Gm15467-201ENSMUST00000120582 445 ntBASIC11.23□□□□□ -0.61
Nkx2-1P50220 Gm11543-201ENSMUST00000120758 370 ntBASIC11.23□□□□□ -0.61
Nkx2-1P50220 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.23□□□□□ -0.61
Nkx2-1P50220 AA543401-201ENSMUST00000164248 1269 ntBASIC11.23□□□□□ -0.61
Nkx2-1P50220 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Gm17968-201ENSMUST00000194902 784 ntBASIC11.23□□□□□ -0.61
Nkx2-1P50220 Gm44492-201ENSMUST00000197012 141 ntBASIC11.23□□□□□ -0.61
Nkx2-1P50220 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.23□□□□□ -0.61
Nkx2-1P50220 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Nkx2-1P50220 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.23□□□□□ -0.61
Nkx2-1P50220 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.23□□□□□ -0.61
Nkx2-1P50220 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Nkx2-1P50220 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.22□□□□□ -0.61
Nkx2-1P50220 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nkx2-1P50220 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.22□□□□□ -0.61
Nkx2-1P50220 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.22□□□□□ -0.61
Nkx2-1P50220 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Nkx2-1P50220 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-1P50220 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.21□□□□□ -0.61
Nkx2-1P50220 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-1P50220 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Nkx2-1P50220 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms