Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.11■□□□□ 0.17
Ercc3P49135 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.11■□□□□ 0.17
Ercc3P49135 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ercc3P49135 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc3P49135 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc3P49135 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc3P49135 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Ercc3P49135 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc3P49135 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc3P49135 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.1■□□□□ 0.17
Ercc3P49135 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc3P49135 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ercc3P49135 Ntrk2-208ENSMUST00000225583 2719 ntBASIC16.1■□□□□ 0.17
Ercc3P49135 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.1■□□□□ 0.17
Ercc3P49135 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc3P49135 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.1■□□□□ 0.17
Ercc3P49135 Gm9794-201ENSMUST00000202370 423 ntBASIC16.1■□□□□ 0.17
Ercc3P49135 Gm7653-201ENSMUST00000214567 508 ntBASIC16.1■□□□□ 0.17
Ercc3P49135 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.1■□□□□ 0.17
Ercc3P49135 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc3P49135 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ercc3P49135 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.1■□□□□ 0.17
Ercc3P49135 Gm15823-201ENSMUST00000064305 670 ntBASIC16.1■□□□□ 0.17
Ercc3P49135 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ercc3P49135 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc3P49135 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ercc3P49135 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Ercc3P49135 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc3P49135 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.1■□□□□ 0.17
Ercc3P49135 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc3P49135 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc3P49135 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc3P49135 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc3P49135 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.1■□□□□ 0.17
Ercc3P49135 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc3P49135 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc3P49135 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.09■□□□□ 0.17
Ercc3P49135 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.09■□□□□ 0.17
Ercc3P49135 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ercc3P49135 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Gm11524-201ENSMUST00000119349 807 ntBASIC16.09■□□□□ 0.17
Ercc3P49135 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.09■□□□□ 0.17
Ercc3P49135 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.09■□□□□ 0.17
Ercc3P49135 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.09■□□□□ 0.17
Ercc3P49135 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.09■□□□□ 0.17
Ercc3P49135 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.09■□□□□ 0.17
Ercc3P49135 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.09■□□□□ 0.17
Ercc3P49135 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Ercc3P49135 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Ercc3P49135 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc3P49135 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ercc3P49135 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.08■□□□□ 0.17
Ercc3P49135 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ercc3P49135 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ercc3P49135 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ercc3P49135 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ercc3P49135 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Ercc3P49135 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc3P49135 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc3P49135 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc3P49135 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc3P49135 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc3P49135 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc3P49135 Gm12490-201ENSMUST00000120255 560 ntBASIC16.08■□□□□ 0.16
Ercc3P49135 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc3P49135 Gm29608-201ENSMUST00000190444 463 ntBASIC16.08■□□□□ 0.16
Ercc3P49135 Gm18018-201ENSMUST00000198273 408 ntBASIC16.08■□□□□ 0.16
Ercc3P49135 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.08■□□□□ 0.16
Ercc3P49135 Gm45384-201ENSMUST00000210451 277 ntBASIC16.08■□□□□ 0.16
Ercc3P49135 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc3P49135 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc3P49135 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc3P49135 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.08■□□□□ 0.16
Ercc3P49135 Gm19220-201ENSMUST00000222682 803 ntBASIC16.08■□□□□ 0.16
Ercc3P49135 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ercc3P49135 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc3P49135 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ercc3P49135 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc3P49135 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ercc3P49135 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.08■□□□□ 0.16
Ercc3P49135 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms