Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cd27P41272 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.88□□□□□ -0.67
Cd27P41272 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.88□□□□□ -0.67
Cd27P41272 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Gm15823-201ENSMUST00000064305 670 ntBASIC10.88□□□□□ -0.67
Cd27P41272 Gm6180-201ENSMUST00000065243 498 ntBASIC10.88□□□□□ -0.67
Cd27P41272 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cd27P41272 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.88□□□□□ -0.67
Cd27P41272 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Cd27P41272 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd27P41272 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cd27P41272 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cd27P41272 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.87□□□□□ -0.67
Cd27P41272 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.87□□□□□ -0.67
Cd27P41272 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.87□□□□□ -0.67
Cd27P41272 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cd27P41272 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.87□□□□□ -0.67
Cd27P41272 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.87□□□□□ -0.67
Cd27P41272 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cd27P41272 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Cd27P41272 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Cd27P41272 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd27P41272 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cd27P41272 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cd27P41272 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cd27P41272 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.86□□□□□ -0.67
Cd27P41272 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cd27P41272 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 Gm38042-201ENSMUST00000191614 5208 ntBASIC10.86□□□□□ -0.67
Cd27P41272 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Cd27P41272 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.86□□□□□ -0.67
Cd27P41272 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.86□□□□□ -0.67
Cd27P41272 Gm14127-201ENSMUST00000117906 678 ntBASIC10.86□□□□□ -0.67
Cd27P41272 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.86□□□□□ -0.67
Cd27P41272 Gm23984-201ENSMUST00000157139 203 ntBASIC10.86□□□□□ -0.67
Cd27P41272 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd27P41272 Gm5069-202ENSMUST00000192714 1011 ntBASIC10.86□□□□□ -0.67
Cd27P41272 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.86□□□□□ -0.67
Cd27P41272 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cd27P41272 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms