Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Abca1P41233 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Abca1P41233 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.29□□□□□ -0.6
Abca1P41233 Gm15236-201ENSMUST00000117309 379 ntBASIC11.29□□□□□ -0.6
Abca1P41233 Gm13350-201ENSMUST00000120519 479 ntBASIC11.29□□□□□ -0.6
Abca1P41233 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.29□□□□□ -0.6
Abca1P41233 Gm5370-201ENSMUST00000187187 574 ntBASIC11.29□□□□□ -0.6
Abca1P41233 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.29□□□□□ -0.6
Abca1P41233 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.29□□□□□ -0.6
Abca1P41233 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.29□□□□□ -0.6
Abca1P41233 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Abca1P41233 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.29□□□□□ -0.6
Abca1P41233 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.29□□□□□ -0.6
Abca1P41233 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Abca1P41233 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Abca1P41233 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Abca1P41233 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abca1P41233 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Abca1P41233 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Abca1P41233 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Abca1P41233 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Abca1P41233 Gm29649-201ENSMUST00000185649 419 ntBASIC11.28□□□□□ -0.6
Abca1P41233 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.28□□□□□ -0.6
Abca1P41233 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Abca1P41233 Matn2-206ENSMUST00000228570 2798 ntBASIC11.28□□□□□ -0.6
Abca1P41233 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Abca1P41233 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.28□□□□□ -0.6
Abca1P41233 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Abca1P41233 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Abca1P41233 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.28□□□□□ -0.6
Abca1P41233 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Gm13689-201ENSMUST00000119360 685 ntBASIC11.28□□□□□ -0.6
Abca1P41233 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.28□□□□□ -0.6
Abca1P41233 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Abca1P41233 Mir8109-201ENSMUST00000184375 117 ntBASIC11.28□□□□□ -0.6
Abca1P41233 Gm9823-201ENSMUST00000051212 327 ntBASIC11.28□□□□□ -0.6
Abca1P41233 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Abca1P41233 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Abca1P41233 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms