Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.37□□□□□ -0.27
Cd9P40240 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Cd9P40240 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cd9P40240 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.36□□□□□ -0.27
Cd9P40240 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.36□□□□□ -0.27
Cd9P40240 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Cd9P40240 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cd9P40240 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.36□□□□□ -0.27
Cd9P40240 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.36□□□□□ -0.27
Cd9P40240 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.36□□□□□ -0.27
Cd9P40240 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Gm38223-201ENSMUST00000194484 695 ntBASIC13.36□□□□□ -0.27
Cd9P40240 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.36□□□□□ -0.27
Cd9P40240 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cd9P40240 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cd9P40240 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cd9P40240 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cd9P40240 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cd9P40240 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Cd9P40240 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.35□□□□□ -0.27
Cd9P40240 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.35□□□□□ -0.27
Cd9P40240 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.35□□□□□ -0.27
Cd9P40240 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.35□□□□□ -0.27
Cd9P40240 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.35□□□□□ -0.27
Cd9P40240 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.35□□□□□ -0.27
Cd9P40240 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cd9P40240 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cd9P40240 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Cd9P40240 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cd9P40240 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cd9P40240 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.34□□□□□ -0.27
Cd9P40240 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cd9P40240 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Cd9P40240 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cd9P40240 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.34□□□□□ -0.27
Cd9P40240 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.34□□□□□ -0.27
Cd9P40240 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms