Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Fen1P39749 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.23
Fen1P39749 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
Fen1P39749 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Fen1P39749 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.64□□□□□ -0.23
Fen1P39749 Gm11025-201ENSMUST00000140773 466 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 AA543401-201ENSMUST00000164248 1269 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Fen1P39749 Gm29310-201ENSMUST00000185468 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm21825-201ENSMUST00000185728 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm29109-201ENSMUST00000185895 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm21896-201ENSMUST00000186520 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm21873-201ENSMUST00000186728 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm21794-201ENSMUST00000187056 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm21880-201ENSMUST00000187275 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm21826-201ENSMUST00000187451 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm21198-201ENSMUST00000188393 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm21749-201ENSMUST00000189343 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm21901-201ENSMUST00000189568 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm29424-201ENSMUST00000189716 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm28599-201ENSMUST00000189838 694 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm21867-201ENSMUST00000189917 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm29269-201ENSMUST00000190087 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm21722-201ENSMUST00000190153 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm28423-201ENSMUST00000190701 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm21899-201ENSMUST00000190745 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm21910-201ENSMUST00000191163 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm21849-201ENSMUST00000191571 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm28678-201ENSMUST00000191593 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm20910-201ENSMUST00000193268 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Gm21871-201ENSMUST00000194621 696 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Fen1P39749 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.64□□□□□ -0.23
Fen1P39749 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.64□□□□□ -0.23
Fen1P39749 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Fen1P39749 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Fen1P39749 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.63□□□□□ -0.23
Fen1P39749 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Gm13823-201ENSMUST00000119930 345 ntBASIC13.63□□□□□ -0.23
Fen1P39749 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.63□□□□□ -0.23
Fen1P39749 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.63□□□□□ -0.23
Fen1P39749 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.63□□□□□ -0.23
Fen1P39749 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.63□□□□□ -0.23
Fen1P39749 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Fen1P39749 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.63□□□□□ -0.23
Fen1P39749 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms