Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sftpa1P35242 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.49□□□□□ -0.41
Sftpa1P35242 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sftpa1P35242 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sftpa1P35242 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sftpa1P35242 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Sftpa1P35242 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sftpa1P35242 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sftpa1P35242 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sftpa1P35242 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sftpa1P35242 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sftpa1P35242 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sftpa1P35242 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sftpa1P35242 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.48□□□□□ -0.41
Sftpa1P35242 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.48□□□□□ -0.41
Sftpa1P35242 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sftpa1P35242 Gm13297-201ENSMUST00000120205 934 ntBASIC12.48□□□□□ -0.41
Sftpa1P35242 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Sftpa1P35242 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.48□□□□□ -0.41
Sftpa1P35242 Gm37489-201ENSMUST00000191883 159 ntBASIC12.48□□□□□ -0.41
Sftpa1P35242 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.48□□□□□ -0.41
Sftpa1P35242 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sftpa1P35242 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.48□□□□□ -0.41
Sftpa1P35242 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sftpa1P35242 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sftpa1P35242 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.47□□□□□ -0.41
Sftpa1P35242 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sftpa1P35242 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sftpa1P35242 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sftpa1P35242 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Sftpa1P35242 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sftpa1P35242 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sftpa1P35242 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sftpa1P35242 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sftpa1P35242 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.47□□□□□ -0.41
Sftpa1P35242 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sftpa1P35242 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.47□□□□□ -0.41
Sftpa1P35242 Gm11591-201ENSMUST00000120063 702 ntBASIC12.47□□□□□ -0.41
Sftpa1P35242 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.47□□□□□ -0.41
Sftpa1P35242 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.47□□□□□ -0.41
Sftpa1P35242 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sftpa1P35242 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.47□□□□□ -0.41
Sftpa1P35242 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sftpa1P35242 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sftpa1P35242 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.47□□□□□ -0.41
Sftpa1P35242 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sftpa1P35242 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.47□□□□□ -0.41
Sftpa1P35242 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sftpa1P35242 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sftpa1P35242 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.47□□□□□ -0.41
Sftpa1P35242 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sftpa1P35242 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sftpa1P35242 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sftpa1P35242 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.47□□□□□ -0.41
Sftpa1P35242 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sftpa1P35242 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sftpa1P35242 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Sftpa1P35242 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.47□□□□□ -0.41
Sftpa1P35242 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.47□□□□□ -0.41
Sftpa1P35242 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sftpa1P35242 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sftpa1P35242 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Sftpa1P35242 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.46□□□□□ -0.41
Sftpa1P35242 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.46□□□□□ -0.41
Sftpa1P35242 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sftpa1P35242 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.46□□□□□ -0.41
Sftpa1P35242 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sftpa1P35242 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sftpa1P35242 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sftpa1P35242 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.46□□□□□ -0.41
Sftpa1P35242 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sftpa1P35242 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sftpa1P35242 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.46□□□□□ -0.41
Sftpa1P35242 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Sftpa1P35242 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sftpa1P35242 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sftpa1P35242 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.46□□□□□ -0.41
Sftpa1P35242 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.46□□□□□ -0.41
Sftpa1P35242 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.46□□□□□ -0.41
Sftpa1P35242 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sftpa1P35242 Gm7809-201ENSMUST00000153199 742 ntBASIC12.46□□□□□ -0.41
Sftpa1P35242 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sftpa1P35242 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms