Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Nedd8P29595 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.49□□□□□ -0.41
Nedd8P29595 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.49□□□□□ -0.41
Nedd8P29595 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.49□□□□□ -0.41
Nedd8P29595 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.49□□□□□ -0.41
Nedd8P29595 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.49□□□□□ -0.41
Nedd8P29595 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.49□□□□□ -0.41
Nedd8P29595 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.49□□□□□ -0.41
Nedd8P29595 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.49□□□□□ -0.41
Nedd8P29595 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nedd8P29595 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.49□□□□□ -0.41
Nedd8P29595 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nedd8P29595 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Nedd8P29595 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nedd8P29595 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.48□□□□□ -0.41
Nedd8P29595 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nedd8P29595 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Nedd8P29595 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Gm11764-201ENSMUST00000120221 623 ntBASIC12.48□□□□□ -0.41
Nedd8P29595 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.48□□□□□ -0.41
Nedd8P29595 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.48□□□□□ -0.41
Nedd8P29595 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.48□□□□□ -0.41
Nedd8P29595 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Nedd8P29595 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC12.48□□□□□ -0.41
Nedd8P29595 Gm10154-201ENSMUST00000084445 354 ntBASIC12.48□□□□□ -0.41
Nedd8P29595 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.48□□□□□ -0.41
Nedd8P29595 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nedd8P29595 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.48□□□□□ -0.41
Nedd8P29595 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Nedd8P29595 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nedd8P29595 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.48□□□□□ -0.41
Nedd8P29595 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nedd8P29595 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Nedd8P29595 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Nedd8P29595 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Nedd8P29595 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nedd8P29595 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.47□□□□□ -0.41
Nedd8P29595 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Nedd8P29595 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.47□□□□□ -0.41
Nedd8P29595 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nedd8P29595 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.47□□□□□ -0.41
Nedd8P29595 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nedd8P29595 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms