Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Mmp3P28862 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Mmp3P28862 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp3P28862 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp3P28862 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Mmp3P28862 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.47□□□□□ -0.09
Mmp3P28862 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Mmp3P28862 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Mmp3P28862 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp3P28862 Mir6420-201ENSMUST00000185032 102 ntBASIC14.47□□□□□ -0.09
Mmp3P28862 Gm37497-201ENSMUST00000195830 798 ntBASIC14.47□□□□□ -0.09
Mmp3P28862 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.47□□□□□ -0.09
Mmp3P28862 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.47□□□□□ -0.09
Mmp3P28862 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp3P28862 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp3P28862 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp3P28862 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp3P28862 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.47□□□□□ -0.09
Mmp3P28862 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.47□□□□□ -0.09
Mmp3P28862 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.47□□□□□ -0.09
Mmp3P28862 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp3P28862 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Mmp3P28862 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp3P28862 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp3P28862 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp3P28862 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp3P28862 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp3P28862 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp3P28862 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp3P28862 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.47□□□□□ -0.09
Mmp3P28862 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Mmp3P28862 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.46□□□□□ -0.09
Mmp3P28862 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.46□□□□□ -0.09
Mmp3P28862 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Mmp3P28862 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.46□□□□□ -0.09
Mmp3P28862 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.46□□□□□ -0.09
Mmp3P28862 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.46□□□□□ -0.09
Mmp3P28862 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Mmp3P28862 Gm6447-201ENSMUST00000118905 835 ntBASIC14.46□□□□□ -0.09
Mmp3P28862 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.46□□□□□ -0.09
Mmp3P28862 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.46□□□□□ -0.09
Mmp3P28862 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.46□□□□□ -0.09
Mmp3P28862 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.46□□□□□ -0.09
Mmp3P28862 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Mmp3P28862 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Mmp3P28862 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Mmp3P28862 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.46□□□□□ -0.1
Mmp3P28862 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Mmp3P28862 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Mmp3P28862 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Mmp3P28862 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp3P28862 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp3P28862 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.45□□□□□ -0.1
Mmp3P28862 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp3P28862 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp3P28862 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp3P28862 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp3P28862 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp3P28862 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp3P28862 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Mmp3P28862 Gm13123-201ENSMUST00000122173 492 ntBASIC14.45□□□□□ -0.1
Mmp3P28862 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp3P28862 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Mmp3P28862 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.45□□□□□ -0.1
Mmp3P28862 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.45□□□□□ -0.1
Mmp3P28862 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.45□□□□□ -0.1
Mmp3P28862 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.45□□□□□ -0.1
Mmp3P28862 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp3P28862 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Mmp3P28862 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp3P28862 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp3P28862 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.45□□□□□ -0.1
Mmp3P28862 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp3P28862 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Mmp3P28862 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.45□□□□□ -0.1
Mmp3P28862 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Mmp3P28862 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Mmp3P28862 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Mmp3P28862 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms